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project info
Start date: 15 April 2020
End date: n/a
Project website: link
funding
Fund: European Regional Development Fund (ERDF)
Total budget: 500 000,00 €
EU contribution: 375 000,00 € (75%)
programme
Programming period: 2014-2021
Managing authority: Sergio Negro

METHAGENOMIC ANALYSIS OF SWABS FROM SARS-COV-2 INFECTED PATIENTS

THE RATIONALE OF THE PROJECT IS TO EXPLOIT TIGEM’S DIFFERENT COMPETENCES IN THE FIELD OF RNA ANALYSIS AND INTERPRETATION THROUGH NGS TO PROCESS GENETIC MATERIAL EXTRACTED FROM NASAL OR PHARYNGEAL SWABS OF SARS-COV-2 PATIENTS.TRAMITE A SINGLE BIOLOGICAL MATERIAL PROCESSING REACTION AND A SINGLE NGS SEQUENCING WE ARE ABLE TO ADAPT OUR TECHNOLOGY TO SIMULTANEOUSLY STUDY ALL RNA SPECIES PRESENT IN THE BUFFER. THE PROJECT WILL PRODUCE THE FOLLOWING RESULTS:- CONFIRMATION OF THE SARS-COV-2 STRAIN AND THE RECONSTRUCTION OF THE SARS-COV-2 VIRUS FAMILY TREE THROUGH THE PATTERN OF MUTATIONS ACQUIRED DURING THE PERIOD OF DIFFUSION IN PATIENTS IN THE CAMPANIA REGION. — CHARACTERISATION OF STRUCTURAL PROTEINS ENCODED BY RNA OF THE SARS-COV-2 STRAIN ISOLATED FROM PATIENTS IN THE CAMPANIA REGION. — IDENTIFICATION OF MOLECULAR MECHANISMS IN RESPONSE TO INFECTION WITH SARS-COV-2 AND MARKERS OF THE STAGE OF THE DISEASE, AND

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